merge_fasta

This utility will merge sequences from two fasta files. The output will contain all sequences from file1, and any sequences from file2 that are not present in file1 (the sequences themselves are compared, rather than the sequence ids).

Merge two fasta files, keeping records in file 2 that do not match sequences in file 1

usage: merge_fasta [-h] file_1 file_2 outfile

Positional Arguments

file_1

first file to merge

file_2

second file to merge

outfile

output file