Index

A

aligned_diff() (in module receptor_utils.novel_allele_name)

B

build_ambiguous_ref() (in module receptor_utils.novel_allele_name)

C

check_conserved_residues() (in module receptor_utils.number_v) chunks() (in module receptor_utils.simple_bio_seq)

closest_aligned_ref() (in module receptor_utils.novel_allele_name) closest_ref() (in module receptor_utils.simple_bio_seq)

D

distribute_cdr() (in module receptor_utils.number_v)

dumb_consensus() (in module receptor_utils.simple_bio_seq)

F

find_indels() (in module receptor_utils.novel_allele_name)

G

gap_align() (in module receptor_utils.number_v) gap_align_aa() (in module receptor_utils.number_v)

gap_align_aa_from_nt() (in module receptor_utils.number_v) gap_nt_from_aa() (in module receptor_utils.number_v) gap_sequence() (in module receptor_utils.number_v)

I

insert_space() (in module receptor_utils.number_v)

M

match_score() (in module receptor_utils.number_v) module receptor_utils receptor_utils.novel_allele_name receptor_utils.number_v receptor_utils.simple_bio_seq

N

name_novel() (in module receptor_utils.novel_allele_name) nt_diff() (in module receptor_utils.number_v) (in module receptor_utils.simple_bio_seq)

number_from_trp() (in module receptor_utils.number_v) number_ighv() (in module receptor_utils.number_v)

P

pretty_gapped() (in module receptor_utils.number_v)

R

read_csv() (in module receptor_utils.simple_bio_seq) read_fasta() (in module receptor_utils.simple_bio_seq) read_imgt_fasta() (in module receptor_utils.simple_bio_seq) read_single_fasta() (in module receptor_utils.simple_bio_seq) receptor_utils module receptor_utils.novel_allele_name module

receptor_utils.number_v module receptor_utils.simple_bio_seq module reverse_complement() (in module receptor_utils.simple_bio_seq) run_tests() (in module receptor_utils.novel_allele_name) (in module receptor_utils.number_v)

S

sample_fasta() (in module receptor_utils.simple_bio_seq)

scored_consensus() (in module receptor_utils.simple_bio_seq) scored_gap_consensus() (in module receptor_utils.simple_bio_seq)

T

toSeqRecords() (in module receptor_utils.simple_bio_seq)

translate() (in module receptor_utils.simple_bio_seq)

W

write_csv() (in module receptor_utils.simple_bio_seq)

write_fasta() (in module receptor_utils.simple_bio_seq)